Updated Makefile

README.md

@@ -60,5 +60,7 @@ Change to the org-mode-poster directory and run 'make poster'.
 
 # Built With
 
-Org-mode 9.1.7 .
+Ubuntu 17.10 on emacs
+25.2.2 and org-mode
+9.1.7.
 

README.org

@@ -116,4 +116,6 @@ Download the repository and run tar xvfz on the tarball.
 Change to the org-mode-poster directory and run 'make poster'.
 
 * Built With
-Org-mode src_elisp{org-version} {{{results(9.1.7)}}} .
+src_bash{lsb_release -sd} {{{results(Ubuntu 17.10)}}} on emacs
+src_elisp{emacs-version} {{{results(25.2.2)}}} and org-mode
+src_elisp{org-version} {{{results(9.1.7)}}}.

src/beamerthemeph.sty

@@ -168,7 +168,7 @@
     % \vspace{-0.2ex}
 
 
-    \begin{tabular}{rllrll}
+    \begin{tabular}{rlrlrl}
       %\textbf{Philipp Homan, MD, PhD} & & & & & \\
       \textbf{\auth} & & & & & \\
       \authemail & & 

src/org-mode-poster_poster.org

@@ -41,11 +41,14 @@
 #+LATEX_HEADER: \newcommand{\Xoi}[1]{#1(i)}
 #+LATEX_HEADER: \newcommand{\frakPQ}[2]{\frac{\Xoi{#1}}{\Xoi{#2}}}
 #+LATEX_HEADER: \newcommand{\DKLPQ}[3]{D_{\mathrm{KL}}(#1 #3 #2)}
+#+LATEX_HEADER: \date{}
+# ----------------------------------------------------------------------
+** Latex macros                                               :ignore:
+# ----------------------------------------------------------------------
 #+LATEX_HEADER: \newcommand{\auth}{Philipp Homan, MD, PhD}
 #+LATEX_HEADER: \newcommand{\authemail}{phoman1@northwell.edu}
 #+LATEX_HEADER: \newcommand{\authtwitter}{@philipphoman}
 #+LATEX_HEADER: \newcommand{\authgithub}{github.com/philipphoman}
-#+LATEX_HEADER: \date{}
 # ----------------------------------------------------------------------
 ** Authors and affiliations                                   :ignore:
 # ----------------------------------------------------------------------
@@ -69,7 +72,28 @@
   ; Nicer formatting for code
   (setq org-latex-listings t)
   (setq org-latex-listings 'minted)
-  '(org-export-latex-listings-langs (quote ((emacs-lisp "Lisp") (lisp "Lisp") (clojure "Lisp") (c "C") (cc "C++") (fortran "fortran") (perl "Perl") (cperl "Perl") (python "Python") (ruby "Ruby") (html "HTML") (xml "XML") (tex "TeX") (latex "TeX") (shell-script "bash") (gnuplot "Gnuplot") (ocaml "Caml") (caml "Caml") (sql "SQL") (sqlite "sql") (R-mode "R"))))
+  '(org-export-latex-listings-langs 
+      (quote ((emacs-lisp "Lisp") 
+              (lisp "Lisp") 
+              (clojure "Lisp") 
+              (c "C") 
+              (cc "C++") 
+              (fortran "fortran") 
+              (perl "Perl") 
+              (cperl "Perl") 
+              (python "Python") 
+              (ruby "Ruby") 
+              (html "HTML") 
+              (xml "XML") 
+              (tex "TeX") 
+              (latex "TeX") 
+              (shell-script "bash") 
+              (gnuplot "Gnuplot") 
+              (ocaml "Caml") 
+              (caml "Caml") 
+              (sql "SQL") 
+              (sqlite "sql") 
+              (R-mode "R"))))
   (setq org-latex-minted-options
      '(("linenos=true") ("bgcolor=lightgray")))
   ; set timestamp format
@@ -134,7 +158,7 @@
 #
 #
 # ----------------------------------------------------------------------
-** End preamble                                                 :ignore:
+** End preamble                                               :ignore:
 # ----------------------------------------------------------------------
 
 * The poster
@@ -155,13 +179,14 @@
 :BEAMER_env: block
 :END:
 - Here we show how org-mode (version src_elisp{org-version}
-  {{{results(9.1.7)}}}) together with emacs (version
-  src_elisp{emacs-version} {{{results(25.2.2)}}}) can be used to make
-  decent looking scientific posters
+  {{{results(9.1.7)}}}) and emacs (version src_elisp{emacs-version}
+  {{{results(25.2.2)}}}) can be used to make decent looking scientific
+  posters
 - With org-mode we can populate the poster with code, graphs and numbers
   from inline code in languages such as R, python, Matlab and even shell
   scripting
-- For example, this poster was created on {{{time(%Y-%m-%d %H:%M)}}}
+- For example, this poster was created on {{{time(%Y-%m-%d %H:%M)}}} on
+  src_bash{lsb_release -sd} {{{results(Ubuntu 17.10)}}}.
 - Inline code could look like this (which will produce a graph; 
   Fig. [[figcode1]]):
 

src/org-mode-poster_poster.tex

@@ -1,4 +1,4 @@
-% Created 2018-04-03 Tue 15:36
+% Created 2018-04-03 Tue 16:20
 % Intended LaTeX compiler: pdflatex
 \documentclass[final]{beamer}
 	         \usetheme{ph}
@@ -23,11 +23,11 @@
 \newcommand{\Xoi}[1]{#1(i)}
 \newcommand{\frakPQ}[2]{\frac{\Xoi{#1}}{\Xoi{#2}}}
 \newcommand{\DKLPQ}[3]{D_{\mathrm{KL}}(#1 #3 #2)}
+\date{}
 \newcommand{\auth}{Philipp Homan, MD, PhD}
 \newcommand{\authemail}{phoman1@northwell.edu}
 \newcommand{\authtwitter}{@philipphoman}
 \newcommand{\authgithub}{github.com/philipphoman}
-\date{}
 \author{
 Philipp Homan$^{1}$
 \\
@@ -37,25 +37,26 @@ Philipp Homan$^{1}$
 \normalsize{Hempstead, NY}
 }
 \usetheme{default}
-\date{2018-04-03 15:35}
+\date{2018-04-03 16:20}
 \title{Using org-mode for scientific posters}
 \begin{document}
 
-\begin{frame}[fragile,label={sec:orge330f04}]{}
+\begin{frame}[fragile,label={sec:org4e5d9c1}]{}
  \begin{columns}
 \begin{column}[t]{0.45\columnwidth}
 \begin{block}{Background}
 \begin{itemize}
 \item Here we show how org-mode (version 
-9.1.7) together with emacs (version
-25.2.2) can be used to make
-decent looking scientific posters
+9.1.7) and emacs (version 
+25.2.2) can be used to make decent looking scientific
+posters
 \item With org-mode we can populate the poster with code, graphs and numbers
 from inline code in languages such as R, python, Matlab and even shell
 scripting
-\item For example, this poster was created on 2018-04-03 15:35
+\item For example, this poster was created on 2018-04-03 16:20 on
+Ubuntu 17.10.
 \item Inline code could look like this (which will produce a graph; 
-Fig. \ref{fig:org646b9c5}):
+Fig. \ref{fig:orgd6095b3}):
 \end{itemize}
 
 \begin{columns}
@@ -71,7 +72,7 @@ hist(x2, col="blue", add=TRUE)
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{3.png}
-\caption{\label{fig:org646b9c5}
+\caption{\label{fig:orgd6095b3}
 This is the output.}
 \end{figure}
 \end{column}
@@ -85,7 +86,7 @@ This is the output.}
 capabilities
 \item Some code to process the first vector from above to make a table out
 of its summary could look like this, which would result in a little
-table (Table \ref{tab:org2f8852f}) :
+table (Table \ref{tab:org6ea52bf}) :
 \end{itemize}
 
 \begin{columns}
@@ -104,7 +105,7 @@ mutate(name=c("x1", "x2"))
 \vspace{2cm}
 
 \begin{table}[htbp]
-\caption{\label{tab:org2f8852f}
+\caption{\label{tab:org6ea52bf}
 A table summarizing the two distributions.}
 \centering
 \begin{tabular}{rrrrrrl}
@@ -125,7 +126,7 @@ minimum & q1 & median & mean & q3 & maximum & name\\
 \begin{block}{Graphics}
 \begin{itemize}
 \item We can use shell scripting to grab an image with curl from the
-internet (Fig. \ref{fig:org0ba80fb}):
+internet (Fig. \ref{fig:orgdecde0e}):
 \end{itemize}
 
 \begin{columns}
@@ -142,7 +143,7 @@ curl -0 https://www.gnu.org/software/emacs/images/emacs.png
 \begin{figure}[htbp]
 \centering
 \includegraphics[page=9,width=0.2\textwidth]{emacs.png}
-\caption{\label{fig:org0ba80fb}
+\caption{\label{fig:orgdecde0e}
 This is the downloaded image.}
 \end{figure}
 \end{column}
@@ -188,7 +189,7 @@ derived as follows:
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{4l.png}
-\caption{\label{fig:org9542cf7}
+\caption{\label{fig:orgad4a0e9}
 This is the left figure of a two-column block, showing the density of \(x1\).}
 \end{figure}
 \end{column}
@@ -198,7 +199,7 @@ This is the left figure of a two-column block, showing the density of \(x1\).}
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{4r.png}
-\caption{\label{fig:org3813d21}
+\caption{\label{fig:orga32513a}
 This is the right figure. It shows the density of \(x2\).}
 \end{figure}
 \end{column}

src/org-mode-poster_poster.tex~

@@ -1,4 +1,4 @@
-% Created 2018-04-03 Tue 15:32
+% Created 2018-04-03 Tue 16:17
 % Intended LaTeX compiler: pdflatex
 \documentclass[final]{beamer}
 	         \usetheme{ph}
@@ -37,25 +37,26 @@ Philipp Homan$^{1}$
 \normalsize{Hempstead, NY}
 }
 \usetheme{default}
-\date{2018-04-03 15:31}
+\date{2018-04-03 16:17}
 \title{Using org-mode for scientific posters}
 \begin{document}
 
-\begin{frame}[fragile,label={sec:org04c7cf4}]{}
+\begin{frame}[fragile,label={sec:orgcb59795}]{}
  \begin{columns}
 \begin{column}[t]{0.45\columnwidth}
 \begin{block}{Background}
 \begin{itemize}
 \item Here we show how org-mode (version 
-9.1.7) together with emacs (version
-25.2.2) can be used to make
-decent looking scientific posters
+9.1.7) and emacs (version 
+25.2.2) can be used to make decent looking scientific
+posters
 \item With org-mode we can populate the poster with code, graphs and numbers
 from inline code in languages such as R, python, Matlab and even shell
 scripting
-\item For example, this poster was created on 2018-04-03 15:31
+\item For example, this poster was created on 2018-04-03 16:17 on
+Ubuntu 17.10.
 \item Inline code could look like this (which will produce a graph; 
-Fig. \ref{fig:orgbc6b6ab}):
+Fig. \ref{fig:org0e374d5}):
 \end{itemize}
 
 \begin{columns}
@@ -71,7 +72,7 @@ hist(x2, col="blue", add=TRUE)
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{3.png}
-\caption{\label{fig:orgbc6b6ab}
+\caption{\label{fig:org0e374d5}
 This is the output.}
 \end{figure}
 \end{column}
@@ -85,7 +86,7 @@ This is the output.}
 capabilities
 \item Some code to process the first vector from above to make a table out
 of its summary could look like this, which would result in a little
-table (Table \ref{tab:org62ea45d}) :
+table (Table \ref{tab:orgd478dd5}) :
 \end{itemize}
 
 \begin{columns}
@@ -104,7 +105,7 @@ mutate(name=c("x1", "x2"))
 \vspace{2cm}
 
 \begin{table}[htbp]
-\caption{\label{tab:org62ea45d}
+\caption{\label{tab:orgd478dd5}
 A table summarizing the two distributions.}
 \centering
 \begin{tabular}{rrrrrrl}
@@ -125,7 +126,7 @@ minimum & q1 & median & mean & q3 & maximum & name\\
 \begin{block}{Graphics}
 \begin{itemize}
 \item We can use shell scripting to grab an image with curl from the
-internet (Fig. \ref{fig:org45de491}):
+internet (Fig. \ref{fig:org0845f41}):
 \end{itemize}
 
 \begin{columns}
@@ -142,7 +143,7 @@ curl -0 https://www.gnu.org/software/emacs/images/emacs.png
 \begin{figure}[htbp]
 \centering
 \includegraphics[page=9,width=0.2\textwidth]{emacs.png}
-\caption{\label{fig:org45de491}
+\caption{\label{fig:org0845f41}
 This is the downloaded image.}
 \end{figure}
 \end{column}
@@ -188,7 +189,7 @@ derived as follows:
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{4l.png}
-\caption{\label{fig:org2b19bfd}
+\caption{\label{fig:orge5967c7}
 This is the left figure of a two-column block, showing the density of \(x1\).}
 \end{figure}
 \end{column}
@@ -198,7 +199,7 @@ This is the left figure of a two-column block, showing the density of \(x1\).}
 \begin{figure}[htbp]
 \centering
 \includegraphics[width=.9\linewidth]{4r.png}
-\caption{\label{fig:org03df045}
+\caption{\label{fig:orga7dbf2c}
 This is the right figure. It shows the density of \(x2\).}
 \end{figure}
 \end{column}